AT1G79520.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.975 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cation efflux family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29912369..29914515 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46951.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.52 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||
| Length | 414 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPSKFLFL VLVLNLQKER KVSEYYKQQE KLLEGFNEME 101: TINETGFVSG APTEEELKKL AKSERLAVHI SNAANLVLFV AKVYASVESR SMAVIASTLD SLLDLLSGFI LWFTANAMRT PNNFRYPIGK RRMQPVGIIV 201: FASVMATLGL QVILESTRLL VSKNGSHMSS TEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVITNSVGL ATAVLAVKFY WWIDPSGAIL 301: IALYTISTWA RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI 401: DFEFTHRPEH KCKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)