AT1G79370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 79, subfamily C, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP79C | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 79, subfamily C, polypeptide 1 (CYP79C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 79c2 (TAIR:AT1G58260.1); Has 27664 Blast hits to 27484 proteins in 1529 species: Archae - 45; Bacteria - 2601; Metazoa - 10490; Fungi - 5132; Plants - 8509; Viruses - 0; Other Eukaryotes - 887 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:29857934..29860163 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62391.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 546 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDYYLNNVIF SVVVTFSITL NIVFLIKSVV ARFLGRRKKL PPCPRGFPII GNLVGMLKNR PTSKWIVRVM NDMKTDIACF RFGRVHVIVI TSDVIAREVV 101: REKDAVFADR PDSYSAEYIS GGYNGVVFDE YGERQMKMKK VMSSELMSTK ALNLLLKVRN LESDNLLAYV HNLYNKDESK TKHGAVVNVR DIVCTHTHNV 201: KMRLLFGRRH FKETTMDGSL GLMEKEHFDA IFAALDCFFS FYVADYYPFL RGWNLQGEEA ELREAVDVIA RYNKMIIDEK IELWRGQNKD YNRAETKNDV 301: PMIKDWLDIL FTLKDENGKP LLTPQEITHL SVDLDVVGID NAVNVIEWTL AEMLNQREIL EKAVEEIDMV VGKERLVQES DVPNLNYVKA CCRETLRLHP 401: TNPFLVPHMA RHDTTLAGYF IPKGSHILVS RPGVGRNPKT WDEPLIYRPE RHITGNEVVL TEPDLRLVSF GTGRRGCVGA KLGTSMIVTL LGRLLQGFDW 501: TIPPGTTDRV ELVESKENLF MANPLMACVK PRLDPNMYPK LWTGPA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)