AT1G74290.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.766 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 668 Blast hits to 667 proteins in 139 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 56; Plants - 310; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:27931836..27934268 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42336.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.85 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||
| Length | 371 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASDSSRKSS LKPSSRKSFL FPSVVIVIVG IIVALTYQSK LKPPQPKLCG SSSGPPITAP RIKLQDGRYL AYKEHGLPRE KANRKIVFIH GSDCCRHDAV 101: FATLLSPDLV EELGVYMVSF DRPGYCESDP HPSRTPRSLV SDIEELDDQL SLGSKFYVIG KSMGGQAAWG CLNLKYIPHR LAGVTLVAPV VNYYWRNLPL 201: NVSTEGFNFQ QKRDQWAVRV AHYAPWLIYW WNTQKWFPGS SIANRDSLLS QSDRDIISKR GYTRKPHWAE VRQQGIHESI NRDMIVGFGN WEFDPLDLDN 301: PFLNNEGFVH LWQGDEDMLV PVKLQRYLAH QLPWVHYHEV PRSGHFFHFT KGVVDNIVTT LLTTDTDTIR Q |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)