AT1G74200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.705 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 16 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 16 (RLP16); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 78773 Blast hits to 22315 proteins in 841 species: Archae - 22; Bacteria - 2210; Metazoa - 13539; Fungi - 553; Plants - 58397; Viruses - 0; Other Eukaryotes - 4052 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27907739..27908647 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33466.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.04 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.19 | ||||||||||||||||||||||||||||||||
| Length | 302 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLTTNGFQR NLPSSLGNME MIEFLDISHN SFHGKLPRSF LKGCDSLIVL KLSHKKLSEE VFPEASNFFS ILELSMDNNL FTGKIGRGLQ SLRSLIMLDI 101: SNNNLSGVIP SWFDQLQDLH SLQISNNLLE GEVPISLFNM SSLQLLALSA NSLSGDLPQA ISGYGALKVL LLRDNNLSGV IPDTLLGKNI IVLDLRNNRL 201: SGNIPEFINT QYIRILLLRG NNLTGSIPRR LCAVRSIHLL DLANNKLNGS IPSCLRNASL GLGRGGYIRR LFIIITFFLW EHLSVHFSNL CSCKMGLLSI 301: MS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)