AT1G74190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.974 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 15 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27902590..27906158 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 107571.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||
| Length | 965 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGKVFLGHN LIWVMLLMGQ LHGYKSCIDE EKIALFELRK HMISRTESES VLPTWTNDTT SDCCRWKGVA CNRVSGRVTE ISFGGLSLKD NSLLNLSLLH 101: PFEDVRSLNL SSSRCSGLFD DVEGYKSLRK LRKLEILDLA SNKFNNSIFH FLSAATSLTT LFLRSNNMDG SFPAKELRDL TNLELLDLSR NRFNGSIPIQ 201: ELSSLRKLKA LDLSGNEFSG SMELQGKFCT DLLFSIQSGI CELNNMQELD LSQNKLVGHL PSCLTSLTGL RVLDLSSNKL TGTVPSSLGS LQSLEYLSLF 301: DNDFEGSFSF GSLANLSNLM VLKLCSKSSS LQVLSESSWK PKFQLSVIAL RSCNMEKVPH FLLHQKDLRH VDLSDNNISG KLPSWLLANN TKLKVLLLQN 401: NLFTSFQIPK SAHNLLFLDV SANDFNHLFP ENIGWIFPHL RYLNTSKNNF QENLPSSLGN MNGIQYMDLS RNSFHGNLPR SFVNGCYSMA ILKLSHNKLS 501: GEIFPESTNF TNILGLFMDN NLFTGKIGQG LRSLINLELL DMSNNNLTGV IPSWIGELPS LTALLISDNF LKGDIPMSLF NKSSLQLLDL SANSLSGVIP 601: PQHDSRNGVV LLLQDNKLSG TIPDTLLANV EILDLRNNRF SGKIPEFINI QNISILLLRG NNFTGQIPHQ LCGLSNIQLL DLSNNRLNGT IPSCLSNTSF 701: GFGKECTSYD YDFGISFPSD VFNGFSLHQD FSSNKNGGIY FKSLLTLDPL SMDYKAATQT KIEFATKHRY DAYMGGNLKL LFGMDLSENE LSGEIPVEFG 801: GLLELRALNL SHNNLSGVIP KSISSMEKME SFDLSFNRLQ GRIPSQLTEL TSLSVFKVSH NNLSGVIPQG RQFNTFDAES YFGNRLLCGQ PTNRSCNNNS 901: YEEADNGVEA DESIIDMVSF YLSFAAAYVT ILIGILASLS FDSPWSRFWF YKVDAFIKKV RNLLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)