AT1G74110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.751 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 78, subfamily A, polypeptide 10 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP78A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 78, subfamily A, polypeptide 10 (CYP78A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 5 (TAIR:AT1G13710.1); Has 31373 Blast hits to 31249 proteins in 1617 species: Archae - 44; Bacteria - 2867; Metazoa - 11374; Fungi - 6846; Plants - 9229; Viruses - 3; Other Eukaryotes - 1010 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27866667..27868368 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60186.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.84 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 537 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA 101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE 201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD 301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR 401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ 501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)