AT1G73460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73450.1); Has 92811 Blast hits to 90539 proteins in 3072 species: Archae - 97; Bacteria - 11008; Metazoa - 34744; Fungi - 12175; Plants - 16778; Viruses - 387; Other Eukaryotes - 17622 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27620122..27624899 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 131253.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.79 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||||||||||||||
| Length | 1169 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MTDQSSVDGI LEFLRNNRFS QAEEALRNEL NNRSDINGFL QKLKLEDKDS NEKAAGNELR RSGSRDSEVS KELIVKEVDC GTSTNGSVIK WENGATADNP 0101: SKKEPVVSSE MSFTFSKNSG DAAAPPDAHS YKFTSRNGTV EPSRNIDDSS SSSLVDLYAF EQSRHGNFAD IDKKIVETGE DIVFFGNKST SWSGNSSKGN 0201: SGSKIKEPNE IHRLVENSGK HDSYKGSILL RSEDVVDTSA NWRECSVKTL FQSSRGDASN SYNLVSSSDK REGKKKADIS DVRVAIKEQE SEVARALFFG 0301: KSQSTFDDKN ISSLGFPLVY DTRKEEFPRL PPVKLKSEDN PLSLHCEEKF ERDGSGPRLI NDEDALLIGS YLDVPIGQEI SSSGGKKSTG GNWLSVSQGI 0401: AEDASDLVSG FATIGDGLSE SVDYRNEYWD SDEYEDDDDI GYVRQPIEDE PWFLAHEIDY PSDHEKGTTR GSPDHHERDA NKDADDQSYA EEASYISGEQ 0501: YLQSKDAEPI SSENDRRLTV SEIYPASKKN DLLAQYDGHL MDEELLSSMR DEPVWQGFVA QSNELLMLGD KKGINVHRKS HRDDVYVEDD QHDSVRSIGV 0601: GINSDAADFG SEVRDSLAGG SSEGDFEYSR DHDPVASRFK QLYSESDKKH IDAPNKNKQQ ASKNDGPDYI ADNDSSGSFH VKIQTDGGFS FGSSQKDGQS 0701: MHAESSKSLW SGNHETVTRD RNTERLSAST AMDDMVATWR RKSSDSSSSH SSVKDNNATS IKSLNSSPSS LSNYACEERK HADKEDDRND SSEIEDDNAT 0801: ALDDEEAVAV QEQVRQIKAQ EEEFETFDLK IVHRKNRTGF EEEKNFNVVL NSVIAGRYHV TEYLGSAAFS KAIQAHDLQT GMDVCIKIIK NNKDFFDQSL 0901: DEIKLLKYVN KHDPADKYHL LRLYDYFYYR EHLLIVCELL KANLYEFHKF NRESGGEVYF TMPRLQSITI QCLESLQFLH GLGLIHCDLK PENILVKSYS 1001: RCEIKVIDLG SSCFETDHLC SYVQSRSYRA PEVILGLPYD KKIDVWSLGC ILAELCTGNV LFQNDSPASL LARVMGIVGS FDNEMLTKGR DSHKYFTKNR 1101: MLYERNQESN RLEYLIPKRT SLRHRLPMGD QGFTDFVAHL LEINPKKRPS AAEALKHPWL SYPYEPISA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)