AT1G73130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17780.2); Has 1447 Blast hits to 774 proteins in 215 species: Archae - 0; Bacteria - 679; Metazoa - 377; Fungi - 171; Plants - 42; Viruses - 6; Other Eukaryotes - 172 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27499467..27501896 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 71071.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.05 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.67 | ||||||||||||||||||||||||
| Length | 646 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGPESKGRAW FSKIYNKLEN LLVEVDSFTS QSTLCLKSSE PPRFEYVRGE SKEVAEDHSS NVQGRHDRVA SPRSESPSDP PSHQNFDIPG HVLVEKRVQG 101: DILKENVVQR DSFEDNSSAS SSSDGEIEST SPLHEEYCDA YMTSTTTLSD EEQLVSDEES QIFPDGERLS TSPLLEEYHD ANLTSAASVG DEEPIVTDKE 201: SHITKSLSNS PSCNSPSDSP PCQNFDILGH VRVEERVQGD ILVENIAHGE NSSASSLDGE ETLSTSPLLE ELCDANLTST STLGGEEPIV TDDESQITNT 301: LTPQKFSAEN SSVFPGEESV QEVRVESSLS DEEILSKSPL LEEHCDANLT STSTLGGEGP IVTDDESLIT NTLTPQKFSE EEILSKSPLL EEHCDANLTS 401: DTTLGDEKPI ITDDESWISN SLTSQKSSAG NSWVFSGEDS VEEVKVKSCR DVVSTESQST QSSMESFGTV VKCNDGPVLA ALGCFRDNDS SLNPLVTKVP 501: DENMRSSNAD NPDDVINNCK SDVTPLDTKD IAFQKEPSYV NDTVRVRIMA ELCGMESRED PLYVEDSELY AIHLRTKKLR SFKRKVLDVL TSKRRREKEY 601: EQLPIWYGDA GMGSDLATKE ESQQVEATDS KSSLLLESED SQWELL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)