AT1G72760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G17540.1); Has 113299 Blast hits to 111842 proteins in 4753 species: Archae - 119; Bacteria - 13200; Metazoa - 41952; Fungi - 9233; Plants - 32236; Viruses - 298; Other Eukaryotes - 16261 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27385421..27388274 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77922.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.60 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 697 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSARRVRRTS EDYGSITAIA IDKDKNSQHA LKWAVENIVA DAPQCVLIHV QLGDTGGHFH QDNPDEAHEF FLPFRGFCAR KGIIAKEVIL HDIDISNAIV 101: NYITNNYYIA NLVVGASARN SFLKKFQSPD VPTTLLKTTP ETCAVFVVTK GKLLKSRSAS HRHKLSRQQN LSSLLYNSTN SIDSDSASIS SPVSTQTNKP 201: NSNFFQPNSP RISTPQSMSE ISQSETDNGS CDMVSTVSSY TVSDSSTTIG SSISSTSTES PLVGNYVEQQ NQNLEAEVRR LRLELKQFNK DKDTTNQKEN 301: SQETPWSDEK IELPRALSDR ETQKTQSAAF QAAEIAKRIA KMESQKRRLL EMQANLDKQM MFTTVSYRRY SIKDVEDATY GFSDALKIGE GGYGPVYKAV 401: LDYTSVAIKI LKSGITEGLK QFQQEIEVLS SMRHPNMVIL LGACPEYGCL VYEYMENGTL EDRLFCKNNT PPLSWRARFR IASEIATGLL FLHQAKPEPL 501: VHRDLKPANI LLDKHLTCKI SDVGLARLVP PAVADTYSNY HMTSAAGTFC YIDPEYQQTG MLGVKSDLYS FGVVLLQIIT AQPAMGLGHK VEMAVENNNL 601: REILDPTVSE WPEEETLELA KLALQCCELR KKDRPDLALV LLPALNRLKE FATEDHERIQ DRTSHVSHEH NSVPLSPIPS SQVSFLEPFF LRDISCK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)