AT1G72620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.795 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G17430.1); Has 6611 Blast hits to 6609 proteins in 1295 species: Archae - 83; Bacteria - 4976; Metazoa - 140; Fungi - 18; Plants - 334; Viruses - 0; Other Eukaryotes - 1060 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27341079..27342401 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38441.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.69 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||
| Length | 335 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSMKSFVHI LRRYISIAIT LFYNLIWCLF DNFDYPILIK LADTFLSLYF LIFCDLRPIT VDLNDGETTL HFWISGHRKI NRPNLVMLHG YGGNSKWQFI 101: HQVSDLSKSF NLFIPDLVFF GKSYSRNTDR TIEFQARSIV GGLKRLGCGD GDLSVYSISY GGFVAYRIAK IWPEMIEKLV IVSSGVGFTQ QQKMTEMKKH 201: GGDVSEILVP SNPRDLRLLV KVSMNTGIRF LDWVPDFILS QFIAVMYETN RQELVDLAKN LLEREEEPEL FSISQRTLIV WGDKDNVFPL EHGRRLQRHL 301: PNSSLEVLKE IGHGVNIEAP TTLNNLIISF VLGVP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)