AT1G72330.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alanine aminotransferase 2 | ||||||||||||
| Curator Summary (TAIR10) |
Encodes for alanine aminotransferase ALAAT2. | ||||||||||||
| Computational Description (TAIR10) |
alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity, ATP binding; INVOLVED IN: biosynthetic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1); Has 25714 Blast hits to 25709 proteins in 2861 species: Archae - 758; Bacteria - 18437; Metazoa - 630; Fungi - 646; Plants - 1232; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27233637..27236191 | ||||||||||||
| Molecular Weight (calculated) | 47713.00 Da | ||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||
| Length | 431 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA 101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI 201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR 301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL 401: ASLVMSPPKK EMEFSHPWLN VQRLWKTLST V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)