AT1G72110.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : O-acyltransferase (WSD1-like) family protein | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G53390.1); Has 1092 Blast hits to 1082 proteins in 164 species: Archae - 2; Bacteria - 845; Metazoa - 10; Fungi - 2; Plants - 216; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:27129253..27131354 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 53547.70 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.77 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.06 | ||||||||||||||||||||||||||||||||||||
Length | 479 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAIERQVTEA EEPVSPFARL FSLPGLDVFN IVTIGCKTEG NASTIVEGIK NTLINHPRFS SILVTGHGEH KGKARWIPTK INVEEHVIVP DIDPNIENPD 101: EFLEDYTSNM ALSPMDMSKP LWEFHLLKLK TSHAEAVTVA RFHHSLGDGM SLMSLLLACT RKTCDPEAFP TFVAPKKNKA KNVCFSLVAW LWFIVRLMFH 201: TCVEVIKSIV FICRASDTSA HIMGKPGATL SANKFIHRII SLDDVKMVKN AMNMTVNDVL FGMVQAGLSR YLNQRYDLET SSKSRKNLHN IGLHGVVFFN 301: LRPNRNIEDL AKMMAKGSKC RWGNSIGYVL IPLGMKPQDD VFEYVRQAKT IMDGKKHSLE PLFSYGLLKV TMEVFGLRGL KTLVKRIFGS TTMIFSNVVG 401: PDEEISFFGH RIAYIAASTF GVPQALNICI QSYVDKLIIN IGVDVDVIPD PHHLCDLIIE ALRMMNSAAP KKVFHASKV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)