AT1G71696.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.873 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : carboxypeptidase D, putative | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 2124 Blast hits to 1909 proteins in 351 species: Archae - 6; Bacteria - 563; Metazoa - 1124; Fungi - 40; Plants - 76; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26967637..26970364 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48233.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.36 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 422 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLLILFFIS LFEGFLERAF SIGKSVNGFP LWVIEISDRP GEIEAEPAFK YIGNVHGDEP VGRELLLRLA NWICDNYKKD PLAQMIVENV HLHIMPSLNP 101: DGFSIRKRNN ANNVDLNRDF PDQFFPFNDD LNLRQPETKA IMTWLRDIRF TASATLHGGA LVANFPWDGT EDKRKYYYAC PDDETFRFLA RIYSKSHRNM 201: SLSKEFEEGI TNGASWYPIY GGMQDWNYIY GGCFELTLEI SDNKWPKASE LSTIWDYNRK SMLNLVASLV KTGVHGRIFS LDKGKPLPGL VVVKGINYTV 301: KAHQTYADYH RLLVPGQKYE VTASSPGYKS KTTTVWLGEN AVTADFILIP ETSSRGNQLR SSCDCSCKSC GQPLLTQFFT ETNNGITLTL FVVVVFLCFL 401: LQRRVRFNLW KQRQSSRRSI TV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)