AT1G71390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.983 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 11 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 11 (RLP11); INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1); Has 113280 Blast hits to 31339 proteins in 1188 species: Archae - 38; Bacteria - 9392; Metazoa - 25624; Fungi - 1167; Plants - 68360; Viruses - 2; Other Eukaryotes - 8697 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26906453..26908807 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88736.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.87 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||
| Length | 784 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTRSHCYWFY CIITIYFSFL IHSLASPSLH FCRHDQRDGL LKFRDEFPIF ESKSSPWNKT TDCCSWDGVT CDDKSGQVIS LDLRSTLLNS SLKTNSSLFR 101: LQYLRHLDLS GCNLHGEIPS SLGNLSRLEN LELSSNRLVG EIPYSIGNLK QLRNLSLGDN DLIGEIPSSL GNLSLLLDLD LWNNSLVGEV PASIGNLNEL 201: RVMSLDRNSL SGSIPISFTN LTKLSEFRIF FNNFTSLPSD LSGFHNLVTF DISANSFSGH FPKFLFSIPS LAWVSMDRNQ FSGPIEFANI SSSSKLQNLI 301: LTRNKLDGSI PESISKFLNL VLLDVAHNNI SGPVPRSMSK LVSLRIFGFS NNKLEGEVPS WLWRLSSTML SHNSFSSFEK IYSKETMIQV LDLSFNSFRG 401: TFPVWICKLK GLHFLDLSNN LFNGSIPLCL RNFNLTGLIL GNNKFSGTLP DIFANNTNLQ SLDVSGNQLE GKFPKSLINC KGLHFVNVES NKIKDTFPSW 501: LGSLPSLQVL ILRSNDFYGP LYHPSMSIGF QGLRIIDISH NGFSGVLPPN FFSSWREMIT LVHGSYEYIE DIQNYSLIYR SMEMVNKGVE MSFERIRQDF 601: RAIDFSENRI YGEIPESIGC LEELRLLNLS GNAFTSDIPR VWENLTKLET LDLSRNKLSG QIPQDLGKLS FLSYMNFSHN RLQGPVPRGT QFQRQRCSSF 701: LDNHRLYGLE DICEETHVPN PTSQPSEDLL DEEEKMFNWV AAAIAYGPGV FCGLVIGYIF TSHHHEWFTE KFGRKKIRVT TSAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)