AT1G71220.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
EMS-mutagenized bri1 suppressor 1 (EBS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, UDP-glucose:glycoprotein glucosyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: guard cell, callus; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495), UDP-glucose:Glycoprotein Glucosyltransferase (InterPro:IPR009448); Has 744 Blast hits to 676 proteins in 227 species: Archae - 0; Bacteria - 109; Metazoa - 278; Fungi - 168; Plants - 73; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:26841664..26851730 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 181815.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.61 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1613 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGTTTNLRSW LYLILLFIVV VGVNAQNRRP KNVQVAVKAK WQGTPLLLEA GELISKESKQ LFWEFTDAWL GSDGDDSDCK SARDCLLKIS KQASTLLAQP 0101: VASLFHFSLT LRSASPRLVL YRQLADESLS SFPHGDDPSA TGCCWVDTGS SLFYDVADLQ SWLASAPAVG DAVQGPELFD FDHVHFDSRA GSPVAVLYGA 0201: VGTDCFRKFH LSLAKAAKEG KVTYVVRPVL PLGCEGKTRP CGAIGARDNV SLAGYGVELA LKNMEYKAMD DSAIKKGITL EDPRTEDLSQ DVRGFIFSKI 0301: LDRKPELRSE VMAFRDYLLS STVSDTLDVW ELKDLGHQTA QRIVHASDPL QSMQEINQNF PSVVSSLSRM KLNESIKDEI LSNQRMVPPG KALLALNGAL 0401: LNIEDIDLYM LMDLAHQELS LANHFSKLKI PDGAIRKLLL TTPLPEPDSY RVDFRSVHVT YLNNLEEDDM YKRWRSNINE ILMPAFPGQL RYIRKNLFHA 0501: VYVIDPATAC GLESIETLRS LYENQLPVRF GVILYSTQLI KTIENNGGQI PSSDAVTNAQ VKEDLSTMVI RLFLYIKEHH GIQTAFQFLG NLNTLRTESA 0601: DSSEADIEQE HVDGAFVETI LPKVKTLPQD ILLKLRQEHT LKEASEASSM FVFKLGLAKL KCSFLMNGLV FDSVEEETLL NAMNEELPKI QEQVYYGQIE 0701: SHTKVLDKLL SESGLSRYNP QIISGGKNKP RFVSLASSTR KGESMLNDVN YLHSPETSED VKYVTHLLAA DVATKKGMKL LHEGVRYLIG GSKSARLGVL 0801: FSSSQNADPH SLLFIKFFEK TASSFSHKEK VLYFLDKLCL FYEREYLLKT SVESASSQMF IDKVLELADE YGLSSKAYRS CLVESVDEEL LKRLTKVAQF 0901: LSWELGLESD ANAIISNGRV IFPVDERTFL GQDLHLLESM EFNQRVKPVQ EIIEGIEWQD VDPDLLTSKY FSDVFMFVSS AMATRDRSSE SARFEVLNSE 1001: YSAVLLGNEN ATIHIDAVID PLSPTGQKLA SLLQVLQKHV QTSMRIVLNP MSSLVDIPLK NYYRYVLPNT DDYSSTGFDV DGPKAFFANM PLSKTLTMNL 1101: DVPEPWLVEP VIAIHDLDNI LLENLGDTTT LQAVFEVESL VLTGHCAEKD HEAPRGLQLI LGTKNRPHLV DTLVMANLGY WQMKVSPGVW YLQLAPGRSS 1201: ELYALKGGND GSQDQSSLKR ITIDDLRGKV VHLEVVKRKG KEHEKLLVPS DGDDAVQQNK EGSWNSNFLK WASGFVGGRQ QSMKGGPDKE HEKGGRQGKT 1301: INIFSIASGH LYERFLKIMI LSVLKNTNRP VKFWFIKNYL SPQFKDVIPH MAQEYNFEYE LITYKWPSWL HKQKEKQRII WAYKILFLDV IFPLSLEKVI 1401: FVDADQIIRT DMGELYDMDI KGRPLAYTPF CDNNREMDGY KFWKQGFWKE HLRGRPYHIS ALYVVDLVKF RETAAGDNLR VFYETLSKDP NSLSNLDQDL 1501: PNYAQHTVPI FSLPQEWLWC ESWCGNATKA KARTIDLCNN PMTKEPKLQG ARRIVTEWPD LDLEARKFTA KILGEDVELN EPVAAPATDK PNPLPSNDIS 1601: EDTEQDLESK AEL |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)