AT1G71120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : GDSL-motif lipase/hydrolase 6 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Contains lipase signature motif and GDSL domain. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:26821072..26822420 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40226.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.69 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||
| Length | 362 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSSSSMDLL MCLLLLISPV VLAKSSSTVP AIFTFGDSIF DAGNNHYNKN CTAQADFPPY GSSFFHRPTG RFTNGRTVAD FISEFVGLPL QKPFLELQIQ 101: ILNGTSNFSN GINFASAGSG LLLDTNKFMG VTPIQTQLQQ FQTLVEQNLI EKSIIQESLF LLETGSNDIF NYFLPFRAPT LSPDAYVNAM LDQVNKTIDQ 201: IYKLGARRIA FFSLGPVGCV PARAMLPNAP TNKCFGKMNV MAKMYNKRLE DIVNIIPTKY PGAIAVFGAV YGITHRFQTY PARYGFSDVS NACCGNGTLG 301: GLMQCGREGY KICNNPNEFL FWDFYHPTEH TYRLMSKALW NGNKNHIRPF NLMALATNKI TF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)