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AT1G70900.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.711
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFBEeggNOG:ENOG4112DAUEMBL:AC008148EMBL:AY050997
EMBL:AY079318EMBL:CP002684EnsemblPlants:AT1G70900EnsemblPlants:AT1G70900.1
entrez:843429GeneID:843429Gramene:AT1G70900.1hmmpanther:PTHR35100
hmmpanther:PTHR35100:SF1KEGG:ath:AT1G70900OMA:HASHFICPhylomeDB:Q9SSK4
PIR:F96733Proteomes:UP000006548RefSeq:NP_565005.1STRING:3702.AT1G70900.1
TAIR:AT1G70900UniGene:At.11632UniProt:Q9SSK4
Coordinates (TAIR10) chr1:+:26732456..26733637
Molecular Weight (calculated) 26699.50 Da
IEP (calculated) 9.24
GRAVY (calculated) 0.11
Length 244 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPQSVSKTS KSLEGVHGVH VVSHSHFGFE SIGQVSGFES ADAGTKQRLF IERVWQQRPP CLRPIHCSIH GDQSILETAA NVITSIPFIF LGMQAPRKNL
101: NMKVYANSLI GVGIASSLYH SSRGKFRKYL RWADYTMIAT ATICLTRALR EENPKFLMAA SALALPFQPL VVSAVHTGMM EVAFAKRALE DPDLKMAHDV
201: HKMSSLLGGA LFIADDLFPE TPFIHAGWHL AAAIGVGTCN KLLQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)