AT1G70430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.621 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 112134 Blast hits to 111193 proteins in 3892 species: Archae - 129; Bacteria - 13354; Metazoa - 42048; Fungi - 11129; Plants - 27216; Viruses - 433; Other Eukaryotes - 17825 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26545589..26548756 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67357.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.04 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||
| Length | 594 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGSSTKRFP LYAKDYELFE EVGEGVSATV YRARCIALNE IVAVKILDLE KCRNDLETIR KEVHIMSLID HPNLLKAHCS FIDSSSLWIV MPYMSGGSCF 101: HLMKSVYPEG LEQPIIATLL REVLKALVYL HRQGHIHRDV KAGNILIHSK GVVKLGDFGV SACMFDSGER MQTRNTFVGT PCWMAPEVMQ QLDGYDFKYL 201: AHGHAPFSKY PPMKVLLMTL QNAPPRLDYD RDKKFSKSFR ELIAACLVKD PKKRPTAAKL LKHPFFKHAR STDYLSRKIL HGLSPLGERF KKLKEAEAEL 301: FKGINGDKEQ LSQHEYMRGI SAWNFDLEAL RRQASLVIIP NEEIYNSEIQ ELNRNGDVPK GKPVIQRSQT MPLEYFSEKA SDMVSESSSQ LTGSLLPSFH 401: RKFLPALGNA CNSSDRAAEK LAFEEPRQVL HPLADTKKIR KAGSDQQEKP KNGYADSPVN RESSTLSKEP LADTKQVRKP GNEQEKPKNG YIVSHVNRES 501: STSEEILPLL QSLLVQNDIQ RAQVIRLIRF FDRTAKTENP ISKTEGVQEK DLQSQVQFLE QSVEKLVEEV QRRKDINSQL EQQISSLISS NNIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)