AT1G69360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF863) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:26072520..26075420 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 99184.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.01 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||
| Length | 896 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGETVHCGSF LSSMRDLSED ISNTCSYSMY CGGDKTLPYG QYQNGFSARP PTDSYERDFL KQTMLEHEAV FKNQVYELHR LYRTQKSLMA EVKGKNFVDH 101: LNNNEPTPGS GIKRGFLFGN SICGEGSTSQ DCNVGKDNKV LEVRPVKVRR TMIDLQLPAD EYLHTEGDNT TCPPYEQSKE VGENIFFESH RNDSSGSSLL 201: MKNSNGFTDL NEPVQCQDSV PVSSSSRDLY SLYGANISHV QGQWVEKNTS QNGWMVLEAG NGKSTPRDKL CLPSHSVQVL SNSAFQPLGY PSTDHSKLSG 301: ERASFKCEVR QRNPEVSYDS YVESSVASNV PSLNHGYRPE SVRPWSHWIS SWENRSSSSV QKPLPLQANP FLTFNTQVRA DSSAEMRSRD SNGLNQGFSS 401: FSEESAFNFP SVNFNHLNNG PKGAVTNGSL CESVMHQSLK NLQGPKKQEC SSGLPWIKPK PLNKNGKTNG GLDLNASANH QFMDERDMGD SSNYVHPQNG 501: LRSVTCSNDA NLRHVEMANS QSRRKILGFP ISQKLSICEE HPSLITSSVC ISNEPKKVNN LVKINLDINL PCEASVSEGV VVDKEEGNKA ATHRQHIDLN 601: FCASEDEDSG FCSNPRVETK ATTLINVEAP LTLESEEEGG KFPEKRDEAG DSVDELIEAA AEAIVTISLS YHCRNTDEAA SSSTDAVDKE PLSWFVNTIA 701: SCGNDLESKI DACLEARDCE GCREECSSGE FDYFEAMTLN LTQTKEEDYM PKPLIPEYLK FDGTGSMGIT SNRPRRGQAR RGRPKRDFQR DILPGLASLS 801: RLEVTEDLQM FGGLMKATGY NWNSGMARRS SNRGRKRLVS NIDRAPVCSS LAQPMNNSSV QMVGLEDRSL TGWGNATRRP RRHRCPAGTP PTVLLT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)