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AT1G69310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : WRKY DNA-binding protein 57
Curator
Summary (TAIR10)
member of WRKY Transcription Factor; Group II-c
Computational
Description (TAIR10)
WRKY DNA-binding protein 57 (WRKY57); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 48 (TAIR:AT5G49520.1); Has 3531 Blast hits to 3086 proteins in 203 species: Archae - 2; Bacteria - 2; Metazoa - 6; Fungi - 13; Plants - 3487; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXW7eggNOG:ENOG410YJN7EMBL:AB493529EMBL:BT026057
EnsemblPlants:AT1G69310EnsemblPlants:AT1G69310.1EnsemblPlants:AT1G69310.2entrez:843262
ExpressionAtlas:Q147N6Gene3D:2.20.25.80GeneID:843262GO:GO:0003700
GO:GO:0043565Gramene:AT1G69310.1Gramene:AT1G69310.2hmmpanther:PTHR31221
hmmpanther:PTHR31221:SF8InterPro:IPR003657KEGG:ath:AT1G69310OMA:NPYYYQE
Pfam:PF03106Pfam:Q9C983Pfscan:PS50811PhylomeDB:Q147N6
PROSITE:PS50811RefSeq:NP_177090.1RefSeq:NP_974112.1SMART:SM00774
SMR:Q147N6STRING:3702.AT1G69310.1SUPFAM:0050605SUPFAM:SSF118290
TAIR:AT1G69310tair10-symbols:ATWRKY57tair10-symbols:WRKY57UniGene:At.35430
UniProt:Q147N6UniProt:Q9C983
Coordinates (TAIR10) chr1:-:26056118..26057909
Molecular Weight (calculated) 32043.60 Da
IEP (calculated) 6.70
GRAVY (calculated) -0.99
Length 287 amino acids
Sequence (TAIR10)
(BLAST)
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)