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AT1G69220.2
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Encodes a putative serine/threonine kinase (SIK1).
Computational
Description (TAIR10)
SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-703-MONOMEReggNOG:ENOG410XP9GeggNOG:KOG0576EMBL:AY072199
EMBL:AY133857EMBL:CP002684EnsemblPlants:AT1G69220EnsemblPlants:AT1G69220.2
entrez:843253ExpressionAtlas:Q8VYC1GeneID:843253GO:GO:0004672
GO:GO:0005524Gramene:AT1G69220.2hmmpanther:PTHR24361hmmpanther:PTHR24361:SF268
HOGENOM:HOG000083385InterPro:IPR000719InterPro:IPR011009Pfam:PF00069
Pfscan:PS50011PhylomeDB:Q8VYC1PROSITE:PS50011Proteomes:UP000006548
Reactome:R-ATH-2559580RefSeq:NP_849865.1SMART:SM00220SMR:Q8VYC1
STRING:3702.AT1G69220.1SUPFAM:SSF56112TAIR:AT1G69220tair10-symbols:SIK1
UniGene:At.10378UniProt:Q8VYC1
Coordinates (TAIR10) chr1:-:26020298..26026119
Molecular Weight (calculated) 89739.20 Da
IEP (calculated) 4.93
GRAVY (calculated) -0.75
Length 809 amino acids
Sequence (TAIR10)
(BLAST)
001: MDHNSPKSRR SRKPEPKPDI YSTFVVHSDS DSDQGRDRDK RKAKPEEDEN VDLYATMVYK GDSDGEGEED DDDDSMLPPL LKRLPKDFGG GASLDYDDDD
101: GDESGDFGTM IVKTDRSSHS KKNSPYSSKP RMGVSPRRRA RGGDEESSDE EDEEEDDDDD DGDYGTFVVK SKDKKGKKKD KEIDMTTMGR AVASMQKSNF
201: GGKTRKLDPS SSSSKLHGED NRKMQQQNRK GSYGSVYKAR DLKTSEIVAV KVISLTEGEE GYEEIRGEIE MLQQCNHPNV VRYLGSYQGE DYLWIVMEYC
301: GGGSVADLMN VTEEALEEYQ IAYICREALK GLAYLHSIYK VHRDIKGGNI LLTEQGEVKL GDFGVAAQLT RTMSKRNTFI GTPHWMAPEV IQENRYDGKV
401: DVWALGVSAI EMAEGLPPRS SVHPMRVLFM ISIEPAPMLE DKEKWSLVFH DFVAKCLTKE PRLRPTAAEM LKHKFVERCK TGASAMSPKI EKSRQIRATM
501: ALQAQSVVAP SLEDTSTLGP KSSEELGITV PSKPPQNSTE APLTSTLNRQ HITGNTVLAG EGGDFGTMIV HGEDETEESD SRSQLVREKE SSSSQFEGVP
601: REFPGEELPD SWIHDKKKPP AIDLPVEASI SQSMQASSSH EHRTKLHNIA GTQMEGGSDA SGSTLKNETV GRKAFALQDK LWSIYAAGNT VPIPFLRATD
701: ISPIALLSEN MIGGMQQDGN GTVAVEALQE LFTSSDPQSK KGRRGQNEMP LPPSVYQRLT TSSSLMNLAQ VLAYHRACYE EMPLQELQAT QEQQTIQNLC
801: DTLRTILRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)