AT1G68880.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : basic leucine-zipper 8 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
basic leucine-zipper 8 (bZIP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1448 Blast hits to 1448 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 298; Fungi - 31; Plants - 1095; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25894499..25894915 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 16246.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.21 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.94 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 138 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGSVYNLPS QNPNPQSLFQ IFVDRVPLSN LPATSDDSSR TAEDNERKRR RKVSNRESAR RSRMRKQRHM EELWSMLVQL INKNKSLVDE LSQARECYEK 101: VIEENMKLRE ENSKSRKMIG EIGLNRFLSV EADQIWTF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)