AT1G68870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SOB five-like 2 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
AtSOFL1 acts redundantly with AtSOFL2 as positive regulator of cytokinin levels and cytokinin-mediated development. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
SOB five-like 2 (SOFL2); BEST Arabidopsis thaliana protein match is: SOB five-like 1 (TAIR:AT1G26210.1); Has 7053 Blast hits to 2605 proteins in 283 species: Archae - 8; Bacteria - 2891; Metazoa - 1431; Fungi - 685; Plants - 445; Viruses - 55; Other Eukaryotes - 1538 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25889117..25889560 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 16389.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.16 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.54 | ||||||||||||||||||||||||||||
| Length | 147 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESPRIHGGA EEKSSCESGW TMYIEDTFHG NHHSEVVYEE EDDGFSVKEV DDDGDGDEDD DDDDDDDSSN NESDDSMTSD ASSWPSTHQP PRSTKNHAAA 101: KNSNAKQVNN QTENRVRDRF SDEGEESELK ARTRTTAASR VKVSKTK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)