AT1G68270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.913 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AMP-dependent synthetase and ligase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 75696 Blast hits to 66693 proteins in 3446 species: Archae - 1253; Bacteria - 49932; Metazoa - 3177; Fungi - 3138; Plants - 2055; Viruses - 1; Other Eukaryotes - 16140 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25588191..25590254 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60212.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.09 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 535 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNMELCEAN NVPLTPITFL KRASECYPNR TSIIYGQTRF TWPQTYDRCC RLAASLISLN IAKNDVVSVV APNTPAIYEM HFAVPMAGAV LNPINTRLDA 101: TSITTILRHA QPKILFIHRN FEPLAREILH LLSCDDLQLN LLVIFIDEYN SAKRVSSEEL DYESLIQMGE PTSPLVENMF RIQNEQDPIS LNYTSGTTAD 201: PKGVVISHRG AYLTSLGVII GWEMSTCPVY LWIFAYVSLQ WMDVYMGNSS ARGHQCVYEP RNPLDMSHRS GPVHLMTGGS PLPAALVKKV QRLGFQVLHV 301: YGLTEATGPA LFCEWQDEWN RLTENQQMEL KARQGLGILS VAEVDVKYNE TQESVPHDGK TMGEIVMKGN NIMKGYLKNS KATFEAFKHG WLNTGDVGVI 401: HPDGHIEIKD RSKDIIISGG ENISSVEVEN ILYKHPRVFE VAVVAMPHRV WGETPCAFIV LQKGETNKED DEYKFVAREK ELIDYCRENL PHFMCPRKVV 501: FLEELPKNGN GKILKPNLRA ITKGLVAEDE ANVIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)