AT1G67290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glyoxal oxidase-related protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT5G19580.1); Has 845 Blast hits to 839 proteins in 168 species: Archae - 0; Bacteria - 317; Metazoa - 1; Fungi - 242; Plants - 264; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25191168..25193160 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67778.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.29 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 615 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKSTRLLWL LSIIVLVAAV SKAVAEVDND DDDDNTSLEG MTTAKRETLE VEDHTSLEGM VKREALEVKP PKAGKGKGKG KGRGTVAAGP EMNWPGQWEL 101: FMKNSGVSAM HAILMPLINK VQFYDATIWR ISQIKLPPGV PCHVFDAKKN KVDCWAHSVL VDINTGDIKP LALTTDTWCS SGGLTVNGTL VSTGGFQGGA 201: NTARYLSTCE NCVWIEYPKA LAARRWYSTQ ATLPDGTFIV VGGRDALNYE YILPEGQNNK KLYDSQLLRQ TDDPEENNLY PFVWLNTDGN LFIFANNRSI 301: LLSPKTNKVL KEFPQLPGGA RNYPGSASSA LLPIRLYVQN PAIIPADVLV CGGAKQDAYF RAERLKIYDW ALKDCARLNI NSAKPVWKTE TMPTSRVMSD 401: TVILPNGEIL IINGAKRGSS GWHLAKEPNF APLLYKPNKP LGQRFKELAP STIPRVYHSI AIALPDGKVL VGGSNTNNGY QFNVEYPTEL RIEKFSPPYL 501: DPALANMRPR IVNTATPKQI KYGQMFDVKI ELKQQNVAKE NVMVTMLAPS FTTHSVSMNM RLLMLGINNV KNVGGDNHQI QAVAPPSGKL APPGYYLLFA 601: VYNGVPSVGE WIQIV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)