AT1G67270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zinc-finger domain of monoamine-oxidase A repressor R1 protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zinc-finger domain of monoamine-oxidase A repressor R1 protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 protein (TAIR:AT1G67780.1); Has 476 Blast hits to 468 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 49; Plants - 218; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25183177..25185793 | ||||||||||||
| Molecular Weight (calculated) | 61122.10 Da | ||||||||||||
| IEP (calculated) | 8.29 | ||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||
| Length | 541 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRKRETNPG VRVVGKRIYD SQNGKSCHQC RQKTLDFAAP CKAMRRKKLC PIKFCYKCLS IRYGENAEEV AKLDDWICPL CRGICICSVC RKAQGLEPTG 101: ILAHEAKARG YSSVYALLEA EGHDKFAYQK KPELVLKKII QIVVLVSACN EGSSSNSESV PGTEVGILDV PKEKKKVVDK RKRAKPSDKL KEEIQLEAQL 201: PEGISLTCVS RIDIPTEEAG NVCQLFEFCS AFGKALALKE GHAETIVREL FICGRNTRRQ QYCSITQMMI QLLDLISKDR EMSLSLSATD SSWFTAIGEI 301: LSKSEVLSDE LPLETFVGGV AAYEKMNASR KLKLLNFLCD ESLSTWAMRN YINSQTEECG ERKKEAKQKA AAAKQKEKQL KQKMQGEVAK SIMEKNGAPL 401: SIEEHNSIVS QIRDEAKEAH EEMMEAKGMK SKMTLICDAR RTEPIMLDDN GFVLWKLKCF EEEQFFLLQD LGTFDDLCPH ERWLAFKPEQ KPEIENISLV 501: RGKKLMQIQK NENPKKNANA EASESSPKPK SKLEFIISEQ Y |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)