AT1G67120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of protein complex assembly; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Midasin (InterPro:IPR012099), ATPase, AAA-5 (InterPro:IPR011704), ATPase, AAA+ type, core (InterPro:IPR003593), von Willebrand factor, type A (InterPro:IPR002035), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25069727..25095526 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 611190.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.92 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 5393 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAIDGSFNLK LALETFSVRC PKVAAFPCFT SILSKGGEVV DNEEVIHALG DAFLHPEFTV PLVHCFLPII RNVVDRVVGL LRLVDDLKSS IDYSDDVSSV 0101: LDNAMTEGIS VIDFYVRRGQ RLELHECACL AFSRALHFNT SLLGSILNYF EKAPPPYERI LVKDIVSESR MEATDAYLLC LRVSYRFLVI RPEVFSKLWD 0201: WSCYLDSMKR LSECPRQQRH FLEKYRDAVW CGIQILSVVL RCSDRLAGCF GFEEEEALSC LLRWEEFCQD IEIEKAGLYI QLPTYTALKS LQQFNTLVPG 0301: INKRQSAGLE ADEPQMKIRR LDTWDVNSFS EPFEIHSRVK KSFEMVSLAV SQKRPVLLYG PSGSGKSALI RKLADESGNH VVFIHMDDQL DGKTLVGTYV 0401: CTDQPGEFRW QPGSLTQAIM NGFWVVLEDI DKAPSDVPLV LSSLLGGSCS FLTSQGEEIR IAETFQLFST ISTPECSVSH IRDAGNSLSP LWRRIVVYPP 0501: DRESLQSILG ARYPNLGPVA EKLIETFETI NSALRPQFSS STTENSATFS SPSRFSLRDL LKWCERVHGL PSYDGHAVYQ EAADIFSASN MSVKNRVAVS 0601: EIVASIWNVA VPESQDKPPI QEFSGILKIG RVSLPLGETA SHDRSRFVET RTSTRLLEKI ARSVEYNEPV LLVGETGTGK TTLVQNLAHW IGQKLTVLNL 0701: SQQSDIVDLL GGFKPIDPKL MCTMVYNEFN ELARDLKIKD DSKIMKWLQD NFRAKKWHTF LTGLLDIIKG IEGRITERME GKIGEARSRS GRKRKKPEEE 0801: LKNCACLRTK VNKIRQQIHS GGMVFTFVEG AFVTALREGH WVLLDEVNLA PPEILGRLIG VLEGVRGSLC LAERGDVMGI PRHLNFRLFA CMNPATDAGK 0901: RDLPFSFRSR FTEYAVDDDI CDDDLEIFVR RFLGGRGSDS KLVANIVWFY KEAKRLSEES LQDGANQKPQ YSLRSLYRAL EYAIKAEAIG GFQKALYDGF 1001: SMFFLSLLDA SSAKIVEPII KRISGENIRS QPLQRYLGEL KGSSDKFVGS YVKTKSVIDH LNHLAHAIFI KRYPVLLQGP TSSGKTSLVK YLAAISGNKF 1101: VRINNHEQTD IQEYLGSYMT DSSGKLVFHE GALVKAVRGG HWIVLDELNL APSDVLEALN RLLDDNRELF VPELSETISA HPNFMLFATQ NPPTLYGGRK 1201: ILSRAFRNRF VEIHVDEIPE DELSEILTTK CSIANSHASK MVEVMKDLQR NRQSSKAFAG KHGYITPRDL FRWAYRFRTY DGTSHEELAR EGYYILAERL 1301: RDDTEKVVVQ EVLERHFRVS LAKDDLYNME LPRLDSIQNR KFTWTQSMRR LFFLIDRSYK LREPVLLVGD TGGGKTTICQ ILSDVKKKRL HILNCHQYTE 1401: TSDFLGGFFP VRDRSKLITE YENQVKQLEL SQALTPFGQD IVICGDISRA EVSIKSVEVA LEKYKNGSVI GVAATPQDVD FLEKIRNNMV MLYQKWRAIF 1501: VWQDGPLVEA MRAGNIVLVD EISLADDSVL ERMNSVLETD RKLSLAEKGG PVLEEVVAHE DFFVLATMNP GGDYGKKELS PALRNRFTEI WVPPITDTEE 1601: LRSIAFSGLS SLKESNVVDP IINFWEWFNR LHTGRTLTVR DLLSWVAFVN MATESLGPAY AILHGAFLVL LDGLSLGTGF SGRDGQDLRE KCFAFLLQQL 1701: ELFASDTLPL ELSRMELYGW GDSKAICEKS KSVRHEGMFG IDPFFISKGD ENPEIGGFEF LAPTTHRNVL RVLRAMQLSK PILLEGSPGV GKTSLILALG 1801: KYSGHKVVRI NLSEQTDMMD LLGSDLPVES DEDMKFAWSD GILLQALKEG SWVLLDELNL APQSVLEGLN AILDHRAQVF IPELGCTFEC PPTFRVFACQ 1901: NPSTQGGGRK GLPKSFLNRF TKVYVDELVE DDYLFICRSL YPSVPSPLLS KLIALNRQLH DGTMLYRKFG HDGSPWEFNL RDVIRSCQFM QEAIHDLEVE 2001: SFLNVLYIQR MRTATDRKEV LRIYKAIFDK TPSINPYPRV QLNPAYLVVG TAAIKRNLNQ SNIASEQLKL LPEIRQNLEA VAHCVQNKWL CILVGPSSSG 2101: KTSVIRILAQ LTGYPLNELN LSSATDSSDL LGCFEQYNAF RNFRLVMTRV EHLVDEYNSL LLQSSQEALF SNRSGLVSRW LSYLNKIDSS LVENPLFFLN 2201: DSETLSTLEE VVEDLEQVLK EGVLPVSWSK KYLEQISKTI LQLQTHEKKQ STKFEWVTGM LIKAIEKGEW VVLKNANLCN PTVLDRINSL VEPCGSITIN 2301: ECGIVNGEPV TVVPHPNFRL FLSVNPKFGE VSRAMRNRGV EVFMMGPHWQ LNEDGSNCEE LVLRGVERFL ALSGIPGYKL VTSMAKAHVH AWLNGQSFGV 2401: RITYLELEQW VHLFQLLLMN GNQLLWSLQL SWEHIYLSSL GVTDGKEVVD FVRETYLSDV ELSELDSFMG GDLYLPGGWP KPFNLRDLTW YSRETTVRQN 2501: CMYLEFLGAQ YASHQPKISD NVKSRDRELA AGEPRIIYSI DSWTLKKVLF PKALIGSSCA PDAANFENDL ASKMLLFAAN WTIEQATEED IQLYLAWFSW 2601: FGSRLQQHCP FLLCFLNTLK VEFEHPIWNH ISRCRKNLKF LCRLDPDAVP IPMLSSKLID VAASNDQSKP YSKSLFESLN SVGVLRRSYQ QWLVESNDNH 2701: TDVSTFTRFL DSLRVLEKKI LCEIVGAPSF SVLIQLYTEV IDNHSFFWSG LVSSSDEYLL FSFWSLIKSI KKMHSFFPGE VQVVLEESKN INNIVLHGHP 2801: EKSMLWAYGG HPSLPVSAEL FHKQQEFLQL CSTVWPLKSE SDEHGNDHLT KAIPFSGPEL CLLALEGLCI SSYIADEDDV DYVAAVQLDE IYQTFLERLK 2901: LEKKRLEDKM GFSEIDNTEN ITASCCVFCP EIVTTGSGFS SWVKTCFIAS SESCSLDVEL LAALQHLLVA RPTEHQDLVD IRKLLKPALE YSLSSTRPPQ 3001: TLVAHQKLLW AIDAHASELG VDTKIAGFAL EIWYWWHSVL WKNSQIGLMN ISDTGNCQIL SPSMLIQPVK TATVAQILEN VFSVKDYSVQ SMKLLSASRY 3101: LWKSSQPYQE MPGSLLSIAR SLFQQIIYTH QKSFESETFV AIKSVFHAIE KKQNKMDGIQ NLISLIGSSS HNKLKSVTHS FVGPLAKRLY SDSSSNEFYC 3201: NLGLAWLYLG GLRFHLLNSL DVIDPAMKIT CKLLKLEEKI SSLELNIKVR GECGYLSGLL YSGNNDESSE HTLSKLKTEH KRLQRKVIFR SDPKKYQDLR 3301: RALDEFAGFL TRPISLVNDI EVLDWNQVVE QVFNWQETAI SFIDRMSSDY SEYVDITQPI QVSVYEMKLG LSLFVSGALL GKLLNRFDID MVDSVMETIY 3401: ALMRFPRDSS IASTTYTECL PPLHLSHGAN SRAKSLGLDV GLLHKLISVS SAEDSRKASE LQLKVALYKN LHARVLQFVA NTGLLDEASF ELLDKIYVEL 3501: ARIWMEMKFQ AKTKADNLPG LYKFRSRDFK IDSVMEVDIS ALGKYFPNES FSEWQEYLAD DDTKNVKDMT HIDQDEENLE DDWDLIQEHL DSIYSTHNEL 3601: FGFCDLSEKS GRFCITDSRR LDSFTDSYEL GVSMIKGLRG LFTSSLDAKL VPEHLLRLCL ENKKNFTSNY QSASKYNFYK DLDGPELGKM VKFLTPLQQR 3701: INSLLQERED HPGLQKLSGV LQMLLAIPSS TPLAKALSGL QFLLCKVHKL QEEGCKLPIS DLLEPIISLA SSWQKVEFER WPTLLDEVQD QYELNARKLW 3801: LPLFSVLFQK DAVEISEHEN ESISQSLVEF IETSNVGEFR RRLQLLFCFL LQLSMGSSLG IYSSDSHKRR VEMCYNIFGF YIQFLPVVME QLDLNRKNVE 3901: TELKEVLKLC RWERPDNYLY NETTKRTRQK VKKLIQKFTD MLRLPVMLVK PDLTKERAQF LPLLDPDLMD GASDMRIEVL VSALDAEQLR DRSSWYVVWW 4001: NKLKESVGRF HQEMHYKTLL MGAEHQYSSP VYQGDWKNLW STVARIGETI AGCSDLWRNS DRDVAKKRAL FELLKLLESS GLQKHKFENI EMSNHFKGLL 4101: YQPAYDPKHL LLLTHTKSNI HPSMGVEDQN KENSLVEWRV ANEFYFKSLA SVQLMLNIDR KHSDVTAEQV KRAISFLNHL VEIQRQQRKS AYAFAELFNR 4201: FRQCVLSLAR LLGDSVGADR KDDSVFSFPQ NQHAVFNCLW LQKQLFDNIT AMLLEESALL RTVGSTHLDS CQAVKTSSRS LLSFIEILIP IAQNSKASLD 4301: RLLLDCNGFI ITPSSSLKQF VTQHMVQVLR QNFDQLTDLE NQISSFCENN EKSYCRDVLL SQFSPVFKEG KLLAENLNCL LNVRDQSTGM EPKERLFLEE 4401: NLASIFANVK DVIGKLCSYK DGSLSQEEEM NITTWDGLFK KAENDLNLDN LCKLLSESFG SIEQLLNSSG VLSAGVGDQL KQLQAFLDLL LSFGDCYLKE 4501: FLAISKTVSL ITHVLASVLA DLFTKGFGIS KNEEDDDSKV DKSEAAEGTG MGDGVGAKDV SDQIEDEDQL HGTDKKEEEE KEQDDVLGKN KGIEMSDEFD 4601: GKEYSVSEDE EEDKEDEGSE DEPLDNGIGD VGSDAEKADE KPWNKDEEDE EENMNEKNES GPSIVDKDTR SRELRAKDDG VETADEPEES NTSDKPEEGN 4701: DENVEQDDFD DTDNLEEKIQ TKEEALGGLT PDVDNEQIDD DMEMDKTEEV EKEDANQQEE PCSEDQKHPE EGENDQEETQ EPSEENMEAE AEDRCGSPQK 4801: EEPGNDLEQE PETEPIEGKE VMSEDMMKPN FRNDNISGVE SGSQNPHGSN VLGAGSTAPQ ENLSATDVTD ELTDSMDLPS SSNTEMNLMM TNMANGETLT 4901: DNLPKMEFPQ NQSSTAQQTK VNPYRNVGDA LKEWKERVRI SSDLGEKQEA ENEMEDPDAS EYGFASQFDA GTSQALGPAL PEQVNTDMRE GESEEEKLAG 5001: NQDDVSPMDI DDLNPENKPA VQSKPSISNS IAEQVQEPDT DRTHQENSPI HNFGDGNSRM DSMVSVDNTF LGEEACNLDR MQVTDNDSES NQDNQEDPDA 5101: RSNAVVLWRR CELLTAKPSQ ELAEQLRLIL EPTLASKLSG DYRTGKRINM KKVIPYIASH YRKDKIWLRR TKPNKRDYQV VIAVDDSRSM SESGCGDFAI 5201: RALATVCRAM SQLELGSLAV ASFGKQGSIK MLHDFGQSFT TESGIKMISN LTFKQENLIE DQPVVNLLRN MNEMLENLAS TRRQSYGSNP LQQLVLIIGD 5301: GKFHEREKLK RTVRSFLQQK RMVVYLLLDD AEQSVFDLAD YVYDGERRPY KKMNYLDSFP FPYYIVLRDI EALPRTLGDV LRQWFELMQS SRD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)