AT1G67000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113853 Blast hits to 112150 proteins in 4512 species: Archae - 151; Bacteria - 11870; Metazoa - 43414; Fungi - 9147; Plants - 32426; Viruses - 293; Other Eukaryotes - 16552 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25004217..25007604 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99415.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.87 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 892 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYYHSLSSYS ILFFLFSLFH HLPCASSNQG LGWCESLFQC GNITADFPFW GGNRHKPCGH PLLELHCNNN NITSLYISNQ EFYVRQINQT SNTLTLARSD 101: LLGSFCSSYA YNTTTLPPEI FELSPTYKSL TVLYHCDPKL SYRSSYTCPA LGTFSMSQSV DYQYSCQNSF TVNVPTSFHP EERGLNLTNL ESALRKGFEV 201: KLVIDEIPCQ QCSSTRGICS FNGTTQSCCN ATSPSGGVSC VPYQHSADEV YRRCSESFSC GSQRDLNYPL WKPGREECGH PNFKLNCSGG FAEINIASVK 301: FRILDSYRSL IRLARSDYIG DLCPANPLTA PFIEKFLPVL ELTGETELLT LYYGCRFNSS DIPANIYVGE LGCDEGRSYY VTRNLSSPLL DSSRGVLNNL 401: REMCKRNVSV PASGPALFDL QTRPNQDNLK MALDQGFRML ITSDCERCRG SGGACGYNQT SSGFGCYCKD GKCGYEYDDG FFRRHRRFIA TLVRYTFIAL 501: GALTGVVIVF LVLLCPCFRV QIFRKRKTSD EVRLQKLKAL IPLKHYTYAE VKKMTKSFTE VVGRGGFGIV YSGTLSDSSM VAVKVLKDSK GTDGEDFINE 601: VASMSQTSHV NIVSLLGFCC EGSRRAIIYE FLGNGSLDKF ISDKSSVNLD LKTLYGIALG VARGLEYLHY GCKTRIVHFD IKPQNVLLDD NLCPKVSDFG 701: LAKLCEKKES ILSLLDTRGT IGYIAPEMIS RLYGSVSHKS DVYSYGMLVL EMIGARKKER FDQNSRSDGS SIYFPEWIYK DLEKANIKDI EKTENGGLIE 801: NGISSEEEEI ARKMTLVGLW CIQSSPSDRP PMNKVVEMME GSLDALEVPP RPVLQQISAS SVSDSFWNSE ESSSASDILV FSTNSKLESS SL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)