AT1G66930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67000.1); Has 118196 Blast hits to 116542 proteins in 4529 species: Archae - 160; Bacteria - 13007; Metazoa - 44331; Fungi - 10242; Plants - 32970; Viruses - 385; Other Eukaryotes - 17101 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24970523..24973069 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75125.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.30 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 674 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLTHLESAL RKGFEVKLVI DEIPCQECSS SRGICGFNST TQICCNVTSL SGGVTCVPQH QPSADELRRR CSERFSCGNQ RNLYYPFWIP GREYCGHPDF 101: KLDCSGGFAE LNIASVNFRI LNMSYDSSNK RLARSDYLND LCPPNPLNDE PLIETVLQFS ADTELLTLYY DCQLNSSATS PFPSSYFGEL GCDEGRSYYV 201: TRNLSSPLLD RFRGVLNNLR EMCKRKVSVP ASGPALNTLQ TNPNSNNLKM ALEHGFELQD NSNCSMCVLS GGSCGYNQNS MAIIIGIFVA LCTIGGFIAF 301: LVLLCPCCKV RIFRNRKTSD DRRQEKLKAL IPLKHYTYAQ VKRMTKSFAE VVGRGGFGIV YRGTLCDGRM VAVKVLKESK GNNSEDFINE VSSMSQTSHV 401: NIVSLLGFCS EGSRRAIIYE FLENGSLDKF ISEKTSVILD LTALYGIALG VARGLEYLHY GCKTRIVHFD IKPQNVLLDD NLSPKVSDFG LAKLCEKKES 501: VMSLMDTRGT IGYIAPEMIS RVYGSVSHKS DVYSYGMLVF EMIGARKKER FGQNSANGSS MYFPEWIYKD LEKADNGDLE HIEIGISSEE EEIAKKMTLV 601: GLWCIQSSPS DRPPMNKVVE MMEGSLDALE VPPRPVLQQI HVGPLLESSW ITEESSSISE IENRNLQVCE KILS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)