AT1G66860.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.984 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I glutamine amidotransferase-like superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT5G38200.1); Has 3601 Blast hits to 3597 proteins in 1187 species: Archae - 19; Bacteria - 2895; Metazoa - 1; Fungi - 3; Plants - 55; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24942240..24944352 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49441.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||||||
| Length | 433 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNPSVNDLS QVLPRVLVVS RRTLRKNKFV DFVGEYHLDL IVENGAVPVI VPRVAGVHKL LESFKPIHGV LLCEGEDIDP SLYESEISSL SPQELDEIRK 101: THASDTAIDK EKDSIEFALA KLCLEQNIPY LGICRGSQVL NVACGGSLYQ DLEKEVTIKV PEEHKRNHID YDDYDGYRHE VKIVKNSPLH KWFKDSLDEE 201: KMEILVNSYH HQGVKRLAQR FVPMAFAPDG LIEGFYDPDM YNPEEGKFLM GLQFHPERMR KNGSDEFDFP GCPVAYQEFA KAVIACQKKV NSFLSVPKKL 301: ELNPEMENKR KILVRSFSLA RSMYTRSHSL KNQSTESELE VGAEFLESNT ALSVQQEMRL KEMGATMRNG GSFTEKLRLD EKKQRKAMNI MKNMNIERLS 401: ELMAFYHLMG KISSEVLERK LHASVSDLNL TPQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)