AT1G66120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AMP-dependent synthetase and ligase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 78414 Blast hits to 71735 proteins in 3650 species: Archae - 1135; Bacteria - 51527; Metazoa - 3303; Fungi - 3365; Plants - 2332; Viruses - 1; Other Eukaryotes - 16751 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24612640..24614690 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63944.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.62 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 572 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNLVLCEAN NVPLTPITFL KRASECYPNR TSIIYGQTRF TWPQTYDRCC RLAASLLSLN ITRNDVVSIL APNVPAMYEM HFSVPMTGAV LNPINTRLDA 101: KTIAIILRHA EPKILFVDYE FAPLIQEVLR LIPTYQSQPH PRIILINEID STTKPFSKEL DYEGLIRKGE PTPSSSASMF RVHNEHDPIS LNYTSGTTAD 201: PKGVVISHQG AYLSALSSII GWEMGIFPVY LWTLPMFHCN GWTHTWSVAA RGGTNVCIRH VTAPEIYKNI ELHGVTHMSC VPTVFRFLLE GSRTDQSPKS 301: SPVQVLTGGS SPPAVLIKKV EQLGFHVMHG YGLTEATGPV LFCEWQDEWN KLPEHQQIEL QQRQGVRNLT LADVDVKNTK TLESVPRDGK TMGEIVIKGS 401: SLMKGYLKNP KATSEAFKHG WLNTGDIGVI HPDGYVEIKD RSKDIIISGG ENISSIEVEK VLYMYQEVLE AAVVAMPHPL WGETPCAFVV LKKGEEGLVT 501: SEGDLIKYCR ENMPHFMCPK KVVFFQELPK NSNGKILKSK LRDIAKALVV REDDAGSKKV HQRSIEHVSS RL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)