AT1G66060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.461 plasma membrane 0.288 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Family of unknown function (DUF577) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT1G66000.1); Has 82 Blast hits to 52 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24594185..24595132 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35842.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.30 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.12 | ||||||||||||||||||||||||||||
| Length | 315 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNQKSPKQP TSQDFTKAAF KLLANPHVEP TVEFIAALTK PPENPEDKDI KFFRFCVANY PGCFSLKLMR VYSSNDPRVP YQIREIAMIL LHVIFIIEEA 101: SLNLAVVHIL SPILISCLEE QVISNNSLKI LSMLVNRVAF EIFTIQEETW YDLREFISSK AESEFAKAVS VFKSLSMPLD GEEFLIPLMD NLLPAILKRL 201: GNKEEESSSQ WGLAFVGGFC AAVHLLETTR VDLVENLANE MLKSVKRGME LGFLGKALRE VETAVVEQLW WYCTTEFRFV LGLISRIDAI VTEETAKNVL 301: QRIKIVVKKK MLEYV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)