AT1G65810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.837 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1); Has 6257 Blast hits to 5371 proteins in 1056 species: Archae - 197; Bacteria - 1787; Metazoa - 1336; Fungi - 1200; Plants - 672; Viruses - 106; Other Eukaryotes - 959 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24477043..24480728 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 120267.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.76 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||
| Length | 1050 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEHLWVAKET KKKEKIIKGR DLVDVVFSWS LRDVLNSNLY RGQVGKIPNT FTSTKEYFES FVKPIIEETH ADLLSSMGTI RRAQAFKFWE IKPGKDFKPP 0101: RDLYYEVTLQ MTNEYMTKGG QNLLEVNDLI AVTDKRPIRI DDLRFSHEPY LLALVCGVNE NNPHLITILA SKPIIFDDDD DIKTSSKRGK GERKSLSFFG 0201: VNLINMMTNI RIWTALHPNP EGGNLKLISR VLQSNNEVDG GSCVSCKENS ESVVSDYSAR MLRSFKLNSS QEDAILRCLE AKSCNHSNNI KLIWGPPGTG 0301: KTKTTSVLLL NFLKMRCRTL TCAPTNIAVL EVCSRLVKLV SESLRFDGYG LGDIVLFGNK ERMKIDDRED LFDVFLEYRV DELYRCFMAL TGWRANVNRM 0401: ICLLSDPKHE FRQFKSVNTT LLSFKDFVEE RLSRLRYDLH HQFTTLCLHL PTSLLSFRVA EKMNQTNNLL RNIAASDVMR DGYGRMKYKL KDTGDENDSR 0501: TQDCLEMLTS ISMSIKLPDF ISKFELQKLC LDNAYLLFCT ASSSARLHMS SPIQLLVIDE AAQLKECESA IPLQLRGLQH AILIGDEKQL PAMIKSNIAS 0601: EADLGRSLFE RLVLLGHNKQ LLNMQYRMHP SISIFPNREF YDMKILDAPS VRLRSYEKKF LPEKMYGPYS FINIAYGREQ FGEGYSSKNL VEVSVVAEIV 0701: SKLYSVSRKT GRTISVGVIS PYKAQVFAIQ ERIGEKYNTE GTFTVSVRSV DGFQGGEEDI IIISTVRSNG NGAIGFLSNQ QRTNVALTRA RYCLWILGNE 0801: ATLTNNRSVW RQLVDDAKAR NCFHNAEEDE SLAQCIERST TALDDLNKLQ NKKLISFENS IWKVWLSYEF LKSLETIVDS EINKRVMSFL EKLSNGKELH 0901: QEVEFESENL LRQHEFDDGL SLIWAIDIFK NNNQHVQVLK IWQVLPSTDV SRVTEHLEKH YRRYTKGKIS RCRYICSQGD LVVPMQWPVD SNSCSKKDIV 1001: SDVSRSFALL SVVEEETVSP KPIKKQVKLK KLWKIRRKVQ LSTSNPKDPK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)