AT1G65770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.537 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ascorbic acid mannose pathway regulator 1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes AMR1 (Ascorbic acid Mannose Pathway Regulator 1). Coordinately and negatively regulates the mannose/L-galactose ascorbic acid biosynthetic pathway in response to developmental and environmental cues. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ascorbic acid mannose pathway regulator 1 (AMR1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G65740.1); Has 278 Blast hits to 274 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 278; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24460656..24461738 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41590.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.21 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||
| Length | 360 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADWSTLPVD LLNMIAGRLF SNIELKRFRS ICRSWRSSVP GAGKKNPFRT RPLILLNPNP NKPLTDHRRR GEFLSRSAFF RVTLSSSPSQ GWLIKSDVDV 101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK 201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT 301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)