AT1G64930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.458 extracellular 0.292 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 87, subfamily A, polypeptide 7 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP89A | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 87, subfamily A, polypeptide 7 (CYP89A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33349 Blast hits to 33201 proteins in 1685 species: Archae - 50; Bacteria - 3939; Metazoa - 11722; Fungi - 7059; Plants - 9217; Viruses - 3; Other Eukaryotes - 1359 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24120926..24122461 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59007.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.44 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
| Length | 511 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEIWLLILGS LSLSLLLNLL FFRLRDSSSL PLPPAPNFFP FLGTLQWLRQ GLGGFNNYVR SVHHRLGPII TLRITSRPAI FVADGSLAHQ ALVLNGAVFA 101: DRPPAAPISK ILSNNQHTIT SCLYGVTWRL LRRNITEILH PSRMKSYSHV RHWVLEILFD RLRKSGGEEP IVVFDHLHYA MFAVLVLMCF GDKLDEKQIK 201: QVEYVQRQML LGFARYSILN LCPKFTKLIL RKRWEEFFQM RREQQDVLLR LIYARRKIVE ERKKRSSEEE EENKEYVQSY VDTLLDVELP DEKRKLNEDE 301: IVSLCSEFLI AGSDTTATVL QWIMANLVKN QEIQERLYEE ITNVVGEEAK VVEEKDTQKM PYLKAVVMEA LRRHPPGNTV LPHSVTEDTV LGGYKVPKKG 401: TINFLVAEIG RDPKVWEEPM AFKPERFMGE EEAVDITGSR GIKMMPFGAG RRICPGIGLA MLHLEYYVAN MVREFQWKEV EGHEVDLTEK VEFTVIMKHP 501: LKAIAVPRRS H |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)