AT1G64255.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.932 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : MuDR family transposase | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, PMZ-type (InterPro:IPR006564), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23844954..23847206 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85544.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.95 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||
| Length | 750 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSEVNVPVFC CWNGCIKDGT NGIYYEGSNY RMTTVKGKTK FNELLDHLYQ VTGLDRKRSK FGIIGRYPTD IQAFRVKYKP LPVVDDTSLE TMLEITTKHP 101: YIKDIDLYLE VESTSVGVID PATCSSPSDI LGGSSKRQKT DIHVKLERET DRNSESDGVV HLVDSSTLNK DSISGHVSKP CMSSLWLDDH DLRVGLCFKD 201: GDELKKAVDW CSLKAQQKCV VRETAKDEYI FECIRWKCKW SLGAARMKKH GLVEIIKYTG PHTCHPIVPE DFKSEFETDE IERAVRYMPT QTISELKKWW 301: KKKIGYELET SDVRLAKEKA IKRVFGDWDQ SFEDFPKLMS ALCSSNGLLV DWKYDLFPNP NFASFCGVFW AFPQSIEGFQ HCRPLIVVDT KNLNCEYQLK 401: LMIASGVDAA NKYFPLAFAV TKEVSTDIWR WFLTGIREKV TQRKGLCLIS SPHPDIIAVV NESGSQWQEP WAYHRFSLNH FYSQFSRVFP SFCLGARIRR 501: AGSTSQKDEF VSYMNDIKEK NPEARKWLDQ FPQNRWALAH DNGRRYGIME INTKALFAVC NAFEQAGHVV TGSVLLLFDE LRSKFDKSFS CSRSSLNCGD 601: VYTEPVMDKL EEFRTTFVTY SYIVTPLDNN AFQVATALDK GECIVQLSDC SCTCGDFQRY KFPCLHALAV CKKLKFNPLQ YVDDCYTLER LKRTYATIFS 701: HVPEMSAWPE ASGVPRLLPP VIPPSPPPSP PTYVSGTKCR TTPLATKKKS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)