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AT1G63960.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Copper transport protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Copper transport protein family; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 107 Blast hits to 107 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2608eggNOG:KOG1603EMBL:AC010852EMBL:CP002684
EnsemblPlants:AT1G63960EnsemblPlants:AT1G63960.1entrez:842699GeneID:842699
Gramene:AT1G63960.1HOGENOM:HOG000237719KEGG:ath:AT1G63960ncoils:Coil
OMA:KRWESAKPIR:G96664Proteomes:UP000006548RefSeq:NP_176579.1
STRING:3702.AT1G63960.1TAIR:AT1G63960UniGene:At.52353UniProt:Q9CAK7
Coordinates (TAIR10) chr1:+:23738201..23738506
Molecular Weight (calculated) 11747.90 Da
IEP (calculated) 6.88
GRAVY (calculated) -1.13
Length 101 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSKEGKLTV IGEFDEMQIL KKLKKRWESA KMATFGPFDP KKEAETAAAA EKKKKEENER EREREREEAL YRSQSHHDTP VCPMHHHTTI VCDHDHGCII
101: S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)