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AT1G63950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Heavy metal transport/detoxification superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G01490.2); Has 169 Blast hits to 169 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2608eggNOG:KOG1603EMBL:AC010852EMBL:CP002684
EMBL:DQ056506EnsemblPlants:AT1G63950EnsemblPlants:AT1G63950.1entrez:842698
GeneID:842698GO:GO:0030001GO:GO:0046872Gramene:AT1G63950.1
hmmpanther:PTHR22814hmmpanther:PTHR22814:SF131HOGENOM:HOG000237719InterPro:IPR006121
KEGG:ath:AT1G63950ncoils:CoilOMA:EQGCVICPfam:PF00403
PhylomeDB:Q9CAK6PIR:F96664Proteomes:UP000006548RefSeq:NP_176578.1
SMR:Q9CAK6STRING:3702.AT1G63950.1SUPFAM:SSF55008TAIR:AT1G63950
UniGene:At.52352UniProt:Q9CAK6
Coordinates (TAIR10) chr1:+:23735000..23735556
Molecular Weight (calculated) 13154.00 Da
IEP (calculated) 8.65
GRAVY (calculated) -0.55
Length 113 amino acids
Sequence (TAIR10)
(BLAST)
001: MIVWMGVYDQ RSKGKITKSI SDLPGIHSSY MDLKEGTLVV MGDVDPVELV RNLRKKWGKA KLTLYVPYDA LKEAKIAEAK QKREEIEREA LYRYNREIRD
101: IFNDKEEQGC VIC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)