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AT1G62380.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25587034 (2015): cytosol
  • PMID:22430844 (2012): Golgi
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ACC oxidase 2
Curator
Summary (TAIR10)
Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.
Computational
Description (TAIR10)
ACC oxidase 2 (ACO2); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity, copper ion binding; INVOLVED IN: response to salt stress, detection of ethylene stimulus, ethylene biosynthetic process; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8564 Blast hits to 8520 proteins in 992 species: Archae - 0; Bacteria - 1100; Metazoa - 104; Fungi - 1037; Plants - 4951; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink).
Protein Annotations
BioGrid:27757EC:1.14.17.4eggNOG:COG3491eggNOG:KOG0143
EMBL:AC003113EMBL:AF016100EMBL:AK230351EMBL:AY045876
EMBL:AY062685EMBL:AY093381EMBL:AY133851EMBL:CP002684
EMBL:Z17775EnsemblPlants:AT1G62380EnsemblPlants:AT1G62380.1entrez:842536
Gene3D:2.60.120.330GeneID:842536Genevisible:Q41931GO:GO:0005507
GO:GO:0005618GO:GO:0005783GO:GO:0005794GO:GO:0005829
GO:GO:0005886GO:GO:0006952GO:GO:0009506GO:GO:0009651
GO:GO:0009693GO:GO:0009727GO:GO:0009735GO:GO:0009815
GO:GO:0010030GO:GO:0031418GO:GO:0071281GO:GO:0071398
GO:GO:0071732Gramene:AT1G62380.1gramene_pathway:1.14.17.4gramene_pathway:ETHYL-PWY
gramene_plant_reactome:1119334gramene_plant_reactome:6876126hmmpanther:PTHR10209hmmpanther:PTHR10209:SF193
HOGENOM:HOG000276735IntAct:Q41931InterPro:IPR005123InterPro:IPR026992
InterPro:IPR027443iPTMnet:Q41931KEGG:ath:AT1G62380KO:K05933
OMA:LACKETEPaxDb:Q41931Pfam:PF03171Pfam:PF14226
Pfam:Q41931Pfscan:PS51471PhylomeDB:Q41931PIR:T01448
PIR:T52267PRIDE:Q41931PRO:PR:Q41931PROSITE:PS51471
ProteinModelPortal:Q41931Proteomes:UP000006548RefSeq:NP_176428.1SMR:Q41931
STRING:3702.AT1G62380.1SUPFAM:SSF51197SwissPalm:Q41931TAIR:AT1G62380
tair10-symbols:ACO2tair10-symbols:ATACO2UniGene:At.24621UniGene:At.37653
UniPathway:UPA00384UniProt:Q41931
Coordinates (TAIR10) chr1:+:23082340..23084068
Molecular Weight (calculated) 36185.00 Da
IEP (calculated) 4.74
GRAVY (calculated) -0.50
Length 320 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKNMKFPVV DLSKLNGEER DQTMALINEA CENWGFFEIV NHGLPHDLMD KIEKMTKDHY KTCQEQKFND MLKSKGLDNL ETEVEDVDWE STFYVRHLPQ
101: SNLNDISDVS DEYRTAMKDF GKRLENLAED LLDLLCENLG LEKGYLKKVF HGTKGPTFGT KVSNYPPCPK PEMIKGLRAH TDAGGIILLF QDDKVSGLQL
201: LKDGDWIDVP PLNHSIVINL GDQLEVITNG KYKSVLHRVV TQQEGNRMSV ASFYNPGSDA EISPATSLVE KDSEYPSFVF DDYMKLYAGV KFQPKEPRFA
301: AMKNASAVTE LNPTAAVETF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)