AT1G61560.4
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Seven transmembrane MLO family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22708875..22711488 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60000.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.04 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||
| Length | 521 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLMGFISLLL TIGQGYISNI CIPKNIAASM HPCSASEEAR KYGKKDVPKE DEEENLRRKL LQLVDSLIPR RSLATKGYDK CAEKGKVAFV SAYGMHQLHI 101: FIFVLAVCHV IYCIVTYALG KTKMRRWKKW EEETKTIEYQ YSHDPERFRF ARDTSFGRRH LSFWSKSTIT LWIVCFFRQF FRSVTKVDYL TLRHGFIMAH 201: LAPGSDARFD FRKYIQRSLE EDFKTIVEIN PVIWFIAVLF LLTNTNGLNS YLWLPFIPFI VILIVGTKLQ VIITKLGLRI QEKGDVVKGT PLVQPGDHFF 301: WFGRPRFILF LIHLVLFTNA FQLAFFVWST VSKQSCILHE LETVDVIIRI SIGLLVQILC SYVTLPLYAL VTQMGSKMKP TVFNERVATA LKSWHHTAKK 401: NIKHGRTSES TTPFSSRPTT PTHGSSPIHL LRNAPHKRSR SVDESFANSF SPRNSDFDSW DPESQHETAE TSNSNHRSRF GEEESEKKFV SSSVELPPGP 501: GQIRTQHEIS TISLRDFSFK R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)