AT1G61270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.659 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Transmembrane amino acid transporter family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G01760.1); Has 4440 Blast hits to 4407 proteins in 395 species: Archae - 7; Bacteria - 281; Metazoa - 1351; Fungi - 614; Plants - 1606; Viruses - 3; Other Eukaryotes - 578 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22599665..22602140 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50328.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.42 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.51 | ||||||||||||||||||||||||||||||||||||
| Length | 451 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKGIPSSSNQ ILNQDLVEDQ SFELEDWLPI TASRNANWYY SAFHNVTAIV GAGVLGLPYA MSELGWGPGV VVLILSWVIT LYTFWQMIEM HEMFEGKRFD 101: RYHELGQAAF GKKLGLYIVV PLQLLVETSA CIVYMVTGGE SLKKIHQLSV GDYECRKLKV RHFILIFASS QFVLSLLKNF NSISGVSLVA AVMSMSYSTI 201: AWVASLTKGV ANNVEYGYKR RNNTSVPLAF LGALGEMAFA YAGHNVVLEI QATIPSTPEN PSKRPMWKGA IVAYIIVAFC YFPVALVGFW TFGNNVEENI 301: LKTLRGPKGL IIVANIFVII HLMGSYQVYA MPVFDMIESV MIKKWHFSPT RVLRFTIRWT FVAATMGIAV ALPHFSALLS FFGGFIFAPT TYFIPCIIWL 401: ILKKPKRFSL SWCINWICII LGVLVMIIAP IGGLAKLMNA LKQPDSSCKS T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)