AT1G59540.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.535 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a kinesin-like protein. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ZCF125; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21874578..21879382 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83174.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.15 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 731 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTGSETDPGI IRRSVRDVFE RIHMISDREF LIRVSYMEIY NEEINDLLAV ENQRLQIHEH LERGVFVAGL KEEIVSDAEQ ILKLIDSGEV NRHFGETNMN 101: VHSSRSHTIF RMVIESRGKD NSSSDAIRVS VLNLVDLAGS ERIAKTGAGG VRLQEGKYIN KSLMILGNVI NKLSDSTKLR AHIPYRDSKL TRILQPALGG 201: NAKTCIICTI APEEHHIEES KGTLQFASRA KRITNCAQVN EILTDAALLK RQKLEIEELR MKLQGSHAEV LEQEILNLSN QMLKYELECE RLKTQLEEEK 301: RKQKEQENCI KEQQMKIENL NNFVTNSDFK RNQSEDFIIS RKTPDGLCNV NDTSDVPGTP CFKSASRSFV VARSNNYSGL SDFSPMVHSL GDVADEDTWM 401: KLNKGFVADL DQIQFTPAVK CQPTPLSIAT TECPRENHSE VEDLKSRIQL LTNENDSLQV KFNEQVLLSN NLMQEMSELK QETLTVKEIP NRLSESVANC 501: KDVYKDVIVT MKSLITDKES PTANLLLGTT EITTSLLATL ETQFSMIMDG QKTGSSIDHP LSDHWETLRV NLKNTTTLLL SDAQAKDEFL NSHNKGQETA 601: ALEEKKLKSE LIIIKERYNE LEKELCLDKQ LLEASRESHE KLIKEVQFLK EERDSLDRKI SQSTQRLRVI ASDKENALKD LNVEVKRRKD MEEEIKHISI 701: AFATRHKSFV SFHSEIKSKM QKLTTQNSKA P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)