AT1G58520.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : lipases;hydrolases, acting on ester bonds | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21729913..21731344 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38108.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.25 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||
| Length | 342 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLQILLLAL VLIAVEANAV KQGINATIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK DYPGGDATGR FSDGRVPSDL IAEKLGLAKT LPAYMNSYLK 101: PEDLLKGVTF ASRGTGYDPL TAKIMSVISV WDQLIYFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQAH RYDRTSYANF LADSAVHFVR 201: ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNEPL NNMAKQFNAR LSPALDSLDK ELDGVILYIN VYDTLFDMIQ HPKKYGCCGK GLLTISYLCN 301: SLNPFTCSNS SSYIFWDSYH PSERAYQVIV DNLLDKYLSK VY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)