AT1G57700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 118165 Blast hits to 116848 proteins in 3803 species: Archae - 91; Bacteria - 12447; Metazoa - 43256; Fungi - 11995; Plants - 30846; Viruses - 422; Other Eukaryotes - 19108 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21371051..21373860 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77592.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.97 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.66 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 692 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCICSKGVR TNDDYIETNH VSIGKENPKA SKKQSDSEET SVNGNEATLR LIPDDVKDTF SDEEVEELEE KKESSFEMKS CESVLQKGNV LEIVDNVGPL 101: QPRMSRIGSV SNGDRAAKVI AGWPSWLVSV AGEAINGWIP RSADSFEKLE MIGQGTYSSV YRARDLETNQ IVALKKVRFA NMDPESVRFM AREIIILRRL 201: NHPNVMKLEG LIISKASGSM YLIFEYMDHD LAGLASTPGI KFSQAQIKCY MKQLLLGLEH CHSCGVLHRD IKCSNLLLDR NNNLKIGDFG LSNFYRGQRK 301: QPLTSRVVTL WYRPPELLLG STDYGVTVDL WSTGCILAEL FTGKPLLPGR TEVEQMHKIF KLCGSPSEEY WRRSRLRHAT IFKPQHPYKR CVADTFKDLP 401: SSALALLEVL LAVEPDARGT ASSALQSEFF TTKPFPSEPS SLPRYQPRKE FDAKLREEEA RRRKGSSSKQ NEQKRLARES KAVPAPSANA ELLASIQKRL 501: GETNRTSISE KFNPEGDSGN GFRIEPLKGN TAQNPYPIYT NGDNHPNGSS QLRTQRSYVQ RGSGQLSRFS NSMAPTRDGS QFGSMRDAIV NQRWLEDGSE 601: NFNLSQRLLE KPNGIRKDDP SSSSKESIMG YDGEKRGRIQ YSGPLIPGEG NLDEMLKEHE RQILLAVRRA QADKAKRDDN RQAQTLFPAN GR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)