AT1G57650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.965 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP binding | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP binding; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G14080.1); Has 13458 Blast hits to 7685 proteins in 338 species: Archae - 14; Bacteria - 666; Metazoa - 852; Fungi - 31; Plants - 11387; Viruses - 8; Other Eukaryotes - 500 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21351291..21354311 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82046.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.47 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||
| Length | 709 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVPWSATVSG AVNISNTSNY TLSDYILTRR MYKLIFFFVR VDETDMIENI AAYISSRFQN SAVIEDIKGS YPKPRFDEDL QIFCKYAFNQ KTPEDGFDEL 101: AREITYHVGE LPLGLKVIGS HFRGLSKEQW PMEVSRLRTY RNGDIERILK FSYDALCDED KDLFLHIACF FNMEKITKVK ELFGHRFKDL RQSLHILEMK 201: SLISIEHTDL EDSEYYESIN MRNLLVQLGQ EIVRKESVLE PGQRRFLIDY KDICAVVSGH TTITGSVVGI DSKNWLSITE KSFKGMSNLQ FLRVKNDLYH 301: PNIISSPGPL TFISPKLRLL DWSCFPMTSL RFINNLEFLV ELRMCYSKLE KLWDGIQLVR NLKHMDLTDS RNLKELPNLS MATNLKNLNL ERCSSLVELP 401: SSIGNATSLH DLRLFKCSSL VELPFSIGNL TNLWKLDLRE CSSLVSLPQL PDSIMVLNAR NCESLEKLDC SFYNPGILLN FVNCFNLNQE ARDLLIETST 501: VNFVVLPGKE VPACFTYRSH GSSVSVKVNQ KLLHTSTKFK ACILFENEVD NETYYFDLDT LCVYTKTNKD CILLDNKGED DEVGIQKRGL VSCRIGSEWR 601: FSEWYPFITD HLYIFEVEAK EVTSTELIFY FEIFDEYSKA REIKECGIIH LLEHHVDDEE KMDTIEKEPK ILIAPKMDCH SEPMPLGKCI VVYGLQIVYL 701: KQYILYRSE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)