AT1G56160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myb domain protein 72 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the R2R3 transcription factor gene family that is involved in mediating induced systemic resistance. Genetic analysis of loss of function mutants and overexpressor lines indicates MYB72 is necessary but not sufficient for ISR.Interacts in vivo with EIL3. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myb domain protein 72 (MYB72); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1); Has 8884 Blast hits to 8238 proteins in 548 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 458; Plants - 5839; Viruses - 5; Other Eukaryotes - 1763 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21022384..21023444 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34108.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.92 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.94 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 296 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKGRAPCCD KNKVKRGPWS PQEDLTLITF IQKHGHQNWR SLPKLAGLLR CGKSCRLRWI NYLRPDVKRG NFSKKEEDAI IHYHQTLGNK WSKIASFLPG 101: RTDNEIKNVW NTHLKKRLTP SSSSSSLSST HDQSTKADHD KNCDGAQEEI HSGLNESQNS ATSSHHQGEC MHTKPELHEV NGLNEIQFLL DHDDFDDITS 201: EFLQDNDILF PLDSLLHNHQ THISTQEMTR EVTKSQSFDH PQPDIPCGFE DTNEESDLRR QLVESTTPNN EYDEWFNFID NQTYFDDFNF VGEVCL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)