AT1G55120.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta-fructofuranosidase 5 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:20566983..20569165 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62701.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.53 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 555 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYKKIQLYVF VFVGYVGPMI YKGIYHLFYQ YNPYGAVWDV RIVWGHSTSV DLVNWISQPP AFNPSQPSDI NGCWSGSVTI LPNGKPVILY TGIDQNKGQV 101: QNVAVPVNIS DPYLREWSKP PQNPLMTTNA VNGINPDRFR DPTTAWLGRD GEWRVIVGSS TDDRRGLAIL YKSRDFFNWT QSMKPLHYED LTGMWECPDF 201: FPVSITGSDG VETSSVGENG IKHVLKVSLI ETLHDYYTIG SYDREKDVYV PDLGFVQNES APRLDYGKYY ASKTFYDDVK KRRILWGWVN ESSPAKDDIE 301: KGWSGLQSFP RKIWLDESGK ELLQWPIEEI ETLRGQQVNW QKKVLKAGST LQVHGVTAAQ ADVEVSFKVK ELEKADVIEP SWTDPQKICS QGDLSVMSGL 401: GPFGLMVLAS NDMEEYTSVY FRIFKSNDDT NKKTKYVVLM CSDQSRSSLN DENDKSTFGA FVAIDPSHQT ISLRTLIDHS IVESYGGGGR TCITSRVYPK 501: LAIGENANLF VFNKGTQSVD ILTLSAWSLK SAQINGDLMS PFIEREESRS PNHQF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)