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AT1G54960.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NPK1-related protein kinase 2
Curator
Summary (TAIR10)
member of MEKK subfamily
Computational
Description (TAIR10)
NPK1-related protein kinase 2 (NP2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 1 (TAIR:AT1G09000.1); Has 135537 Blast hits to 133200 proteins in 4901 species: Archae - 150; Bacteria - 15240; Metazoa - 51035; Fungi - 12941; Plants - 33422; Viruses - 585; Other Eukaryotes - 22164 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G54960-MONOMERBioGrid:27162EC:2.7.11.25eggNOG:ENOG410XQGS
eggNOG:KOG0198EMBL:AB000798EMBL:AC064840EMBL:AC069144
EMBL:CP002684EnsemblPlants:AT1G54960EnsemblPlants:AT1G54960.1entrez:841937
GeneID:841937Genevisible:Q9FZ36GO:GO:0004709GO:GO:0005524
GO:GO:0005737GO:GO:0005874GO:GO:0043622Gramene:AT1G54960.1
hmmpanther:PTHR24361hmmpanther:PTHR24361:SF315HOGENOM:HOG000033953InParanoid:Q9FZ36
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
iPTMnet:Q9FZ36KEGG:ath:AT1G54960MINT:MINT-8067973ncoils:Coil
PaxDb:Q9FZ36Pfam:PF00069Pfam:Q9FZ36Pfscan:PS50011
PhylomeDB:Q9FZ36PIR:A96591PRIDE:Q9FZ36PRO:PR:Q9FZ36
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FZ36
Proteomes:UP000006548RefSeq:NP_175894.4scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9FZ36STRING:3702.AT1G54960.1SUPFAM:SSF56112
TAIR:AT1G54960tair10-symbols:ANP2tair10-symbols:MAPKKK2tair10-symbols:NP2
UniGene:At.37136UniProt:Q9FZ36
Coordinates (TAIR10) chr1:+:20500058..20503587
Molecular Weight (calculated) 66735.40 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.59
Length 606 amino acids
Sequence (TAIR10)
(BLAST)
001: MVFAKSQSPP NNSTVQIKPP IRWRKGQLIG RGAFGTVYMG MNLDSGELLA VKQVLITSNC ASKEKTQAHI QELEEEVKLL KNLSHPNIVR YLGTVREDET
101: LNILLEFVPG GSISSLLEKF GAFPESVVRT YTNQLLLGLE YLHNHAIMHR DIKGANILVD NQGCIKLADF GASKQVAELA TISGAKSMKG TPYWMAPEVI
201: LQTGHSFSAD IWSVGCTVIE MVTGKAPWSQ QYKEIAAIFH IGTTKSHPPI PDNISSDAND FLLKCLQQEP NLRPTASELL KHPFVTGKQK ESASKDLTSF
301: MDNSCSPLPS ELTNITSYQT STSDDVGDIC NLGSLTCTLA FPEKSIQNNS LCLKSNNGYD DDDDNDMCLI DDENFLTYNG ETGPSLDNNT DAKKSCDTMS
401: EISDILKCKF DENSGNGETE TKVSMEVDHP SYSEDENELT ESKIKAFLDD KAAELKKLQT PLYEEFYNGM ITCSPICMES NINNNKREEA PRGFLKLPPK
501: SRSPSQGHIG RSPSRATDAA CCSKSPESGN SSGAPKNSNA SAGAEQESNS QSVALSEIER KWKEELDQEL ERKRREITRQ AGMGSSPRDR SLSRHREKSR
601: FASPGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)