AT1G53430.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat transmembrane protein kinase | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:19936073..19940959 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 110238.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.73 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 997 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIQTLRTIF RKLQNQTVNI ERTSCSDQNW NFVVESASNS PTSNITCDCT FNASSVCRVT NIQLKSFSLP GIFPPEFGNL TRLREIDLSR NFLNGTIPTT 101: LSQIPLEILS VIGNRLSGPF PPQLGDITTL TDVNLETNLF TGPLPRNLGN LRSLKELLLS ANNFTGQIPE SLSNLKNLTE FRIDGNSLSG KIPDFIGNWT 201: LLERLDLQGT SMEGPIPPSI SNLTNLTELR ITDLRGQAAF SFPDLRNLMK MKRLGPIPEY IGSMSELKTL DLSSNMLTGV IPDTFRNLDA FNFMFLNNNS 301: LTGPVPQFII NSKENLDLSD NNFTQPPTLS CNQLDVNLIS SYPSVTDNSV QWCLREGLPC PEDAKQSSLF INCGGSRLKI GKDTYTDDLN SRGQSTFSSV 401: SERWGYSSSG VWLGKEDAGY LATDRFNLIN GSTPEYYKTA RLSPQSLKYY GLCLRRGSYK LQLHFAEIMF SNDQTFNSLG RRIFDIYVQG NLLERDFNIA 501: ERAGGVGKPF IRQIDGVQVN GSTLEIHLQW TGKGTNVIPT RGVYGPLISA ITITPNFKVD TGKPLSNGAV AGIVIAACAV FGLLVLVILR LTGYLGGKEV 601: DENEELRGLD LQTGSFTLKQ IKRATNNFDP ENKIGEGGFG PVYKGVLADG MTIAVKQLSS KSKQGNREFV TEIGMISALQ HPNLVKLYGC CIEGKELLLV 701: YEYLENNSLA RALFGTEKQR LHLDWSTRNK ICIGIAKGLA YLHEESRLKI VHRDIKATNV LLDLSLNAKI SDFGLAKLND DENTHISTRI AGTIGYMAPE 801: YAMRGYLTDK ADVYSFGVVC LEIVSGKSNT NYRPKEEFVY LLDWAYVLQE QGSLLELVDP DLGTSFSKKE AMRMLNIALL CTNPSPTLRP PMSSVVSMLE 901: GKIKVQPPLV KREADPSGSA AMRFKALELL SQDSESQVST YARNREQDIS SSSMDGPWVD SSFSEPGKDV SLQQQEEGRS SSSSRKLLDD LTDVKIE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)