AT1G52700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.714 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G15650.2); Has 2146 Blast hits to 2133 proteins in 591 species: Archae - 4; Bacteria - 780; Metazoa - 345; Fungi - 280; Plants - 195; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19631186..19633366 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27476.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.06 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||
| Length | 255 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG 101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV 201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)